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a_tartaruga | 5 months ago

It's a bad idea for a bunch of reasons but you could always do it yourself: https://nanoporetech.com/products/sequence/minion

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greazy|5 months ago

Suggesting ONT is like suggesting getting a cpu without mentioning everything else that's required.

Even then, you'll need expertise in analysing the output reads. And EVEN then it's difficult to accurately assess variants.

leoh|5 months ago

Why is a bad idea for a bunch of reasons?

a_tartaruga|5 months ago

It is an expensive research project. Actually doing this starting from no experience or tools you're probably looking at 6 months - 1 year and 10k. A little support from trained biologists would help a lot though.

Using DIY tools and not being a trained biostatistician or whoever usually looks at these things you are very likely to face errors you don't know how to account for. I would guess the odds are high you'll encounter scary false positives for example.

It sounds really fun though, something I've always wanted to do with more time.