This is because each "atom" is of a considerable size to the larger clumps and imparts its excess momentum as angular momentum when it joins a clump. "Atoms" that are rotating around a clump in the opposite direction tend to skip off, and thus don't join and slow the rotation. I think.
jbri|12 years ago
If you restart the simulation a few times, you should eventually get something where everything forms into one clump with low initial angular momentum. If you keep watching from that point, you'll see the clump's rotation accelerate entirely on its own.
I'm not entirely sure on the cause, but it does seem to be a simulation flaw.
drakeandrews|12 years ago